Flatsonar

InVesalius

by Centro de Tecnologia da Informação Renato Archer

3D medical imaging reconstruction software

Broad permissions Flathub reviewed GPL-2.0-only v3.1.999982
Install Source code
Screenshot 1 of InVesalius Screenshot 2 of InVesalius

About

InVesalius generates 3D medical imaging reconstructions based on a sequence of 2D DICOM files acquired with CT or MRI equipments. InVesalius is internationalized (currently available in English, Portuguese, French, Spanish, Turkish, Italian, Czech, Japanese, Catalan, Korean, Romanian and German) and provides several tools:

  • DICOM support including: (a) ACR-NEMA version 1 and 2; (b) DICOM version 3.0 (including various encodings of JPEG -lossless and lossy-, RLE)
  • Image manipulation features (zoom, pan, rotation, brightness/contrast, etc)
  • Segmentation based on 2D slices
  • Pre-defined threshold ranges according to tissue of interest
  • Segmentation based on watershed
  • Region growing segmentation
  • Edition tools (similar to Paint Brush) based on 2D slices
  • Semi-automatic segmentation based on Watershed
  • 3D surface creation
  • 3D surface connectivity tools
  • 3D surface exportation (including: binary STL, OBJ, VRML, Inventor)
  • High-quality volume rendering projection
  • Pre-defined volume rendering presets
  • Volume rendering crop plane
  • Picture exportation (including: BMP, TIFF, JPG, PostScript, POV-Ray)
  • Minimum, Maximum or Mean Intensity Projection, Maximum Intensity Difference Accumulation and Contour based visualizations

Permissions

2 permissions weaken the sandbox. Flatsonar asks before installing.

  • X11 display: X11 lets apps read input and windows of other apps
    --socket=x11
  • full access to your home folder
    --filesystem=home
  • network
    --share=network
  • inter-process communication (needed for X11)
    --share=ipc
  • GPU acceleration
    --device=dri
  • access to /media
    --filesystem=/media
  • access to /run/media
    --filesystem=/run/media

Who publishes this

On Flathub: the manifest was reviewed and built on Flathub's infrastructure, but the developer has not verified ownership of the app id.

  • on Flathub: manifest reviewed and built by Flathub; the developer has not verified the app id
    publisher:flathub

Maintenance

Recent activity on the upstream repository, or built and reviewed by Flathub.

No staleness signals: recent activity, or built and reviewed by Flathub.